AKAP-5 / TRP channels

Name: A-kinase anchor protein 5 (AKAP-5)
Official Symbol: AKAP5 provided by HGNC
Function:
May anchor the PKA protein to cytoskeletal and/or organelle-associated proteins, targeting the signal carried by cAMP to specific intracellular effectors. Association with to the beta2-adrenergic receptor (beta2-AR) not only regulates beta2-AR signaling pathway, but also the activation by PKA by switching off the beta2-AR signaling cascade.
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt) Nucleic Acids Res. 40: D71-D75 (2012).
Species External DB Questionmark
Entrez Gene UniprotKB DIP IntAct MINT BioGRID STRING IUPHAR-DB KEGG OMIM
Human
Seq		 9495External P24588External DIP-186NExternal P24588External MINT-1733931External 114874External P24588External   hsa:9495External 604688External
Mouse
Seq		 238276External D3YVF0External       231964External     mmu:238276External  
Rat
Seq		 171026External P24587External     UNK-5374438External 251053External P24587External   rno:171026External  
Biological Process:
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
Disease: No information in OMIM
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
Arrow2 Screening Arrow2 Validation: In vitro validation Arrow2 Validation: In vivo validation Arrow2 Characterization Arrow2 Functional consequence Arrow2 top
Screening Toggle
  Experimental screening Non-experimental screening Reference
TRP channel construct Interactor source
TRP channel Interactor Method Species Region Species Organ/tissue Sample type
TRPA1 Link AKAP-5 Speculation Prediction 18701070
TRPM8 Link AKAP-5 Speculation Prediction 18701070
TRPV1 Link AKAP-5 Inference Prediction 18381233
TRPV2 Link AKAP-5 Speculation Prediction 18701070
TRPV3 Link AKAP-5 Speculation Prediction 18701070
TRPV4 Link AKAP-5 Speculation Prediction 18701070
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Arrow2 Screening Arrow2 Validation: In vitro validation Arrow2 Validation: In vivo validation Arrow2 Characterization Arrow2 Functional consequence Arrow2 top
Validation: In vitro validation Toggle
  Assay with recombinant proteins Reference
TRP channel construct Interactor construct
TRP channel Interactor Method Species Region Expression system Species Region Expression system
TRPV1 Link AKAP-5 Fusion protein-pull down assay Human 681-839 E. coli Not used HEK293 lysates 18701070
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Arrow2 Screening Arrow2 Validation: In vitro validation Arrow2 Validation: In vivo validation Arrow2 Characterization Arrow2 Functional consequence Arrow2 top
Validation: In vivo validation Toggle
  Assay with endogenous proteins Assay with overexpressed proteins Reference
Cell or tissue Cell or tissue TRP channel construct Interactor construct
TRP channel Interactor Method Species Region Species Region
TRPA1 Link AKAP-5 Co-immunoprecipitation HEK293 Mouse Full-length Not used 18701070
TRPM8 Link AKAP-5 Co-immunoprecipitation HEK293 Rat Full-length Not used 18701070
TRPV1 Link AKAP-5 Co-immunofluorescence staining Rat dorsal root ganglion neuron 18701070
TRPV1 Link AKAP-5 Co-immunofluorescence staining Rat trigeminal ganglia neuron 18381233
TRPV1 Link AKAP-5 Co-immunofluorescence staining Mouse dorsal root ganglion tissue 18463244
TRPV1 Link AKAP-5 Co-immunoprecipitation Rat dorsal root ganglion neuron 18701070
TRPV1 Link AKAP-5 Co-immunoprecipitation HEK293 Human Full-length Not used 18701070
TRPV1 Link AKAP-5 Co-immunoprecipitation Rat trigeminal ganglia neuron 22789851
TRPV1 Link AKAP-5 Co-immunoprecipitation Rat trigeminal ganglia neuron 18381233
TRPV1 Link AKAP-5 Co-immunoprecipitation CHO Rat Full-length Rat Full-length 18381233
TRPV1 Link AKAP-5 Co-immunoprecipitation Mouse spinalcord tissue 18463244
TRPV1 Link AKAP-5 Co-immunoprecipitation Mouse dorsal root ganglion tissue 18463244
TRPV1 Link AKAP-5 Co-immunoprecipitation HEK293 Human Full-length Human Full-length 23264624
TRPV1 Link AKAP-5 Co-immunoprecipitation HEK293 Human Full-length Mouse Full-length 23264624
TRPV2 Link AKAP-5 Co-immunoprecipitation HEK293 Human Full-length Not used 18701070
TRPV3 Link AKAP-5 Co-immunoprecipitation HEK293 Mouse Full-length Not used 18701070
TRPV4 Link AKAP-5 Co-immunoprecipitation HEK293 Human Full-length Not used 18701070
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Arrow2 Screening Arrow2 Validation: In vitro validation Arrow2 Validation: In vivo validation Arrow2 Characterization Arrow2 Functional consequence Arrow2 top
Characterization Toggle
  Binding region mapping Stoichiometry Affinity (Kd) Reference
TRP channel Interactor
TRP channel Interactor Method Species Region Species Region
TRPV1 Link AKAP-5 Co-immunoprecipitation Human Not determined Human 326-336 23699529
TRPV1 Link AKAP-5 Co-immunoprecipitation Human 736-749 Human Not determined 18701070
TRPV1 Link AKAP-5 Fluorescence resonance energy transfer Human Not determined Human 326-336 23699529
TRPV1 Link AKAP-5 Fusion protein-pull down assay Human 736-749 Human Not determined 18701070
TRPV1 Link AKAP-5 Patch clamp Human 738 ?745 Human Not determined 23616546
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Arrow2 Screening Arrow2 Validation: In vitro validation Arrow2 Validation: In vivo validation Arrow2 Characterization Arrow2 Functional consequence Arrow2 top
Functional consequence Toggle
TRP channel Interactor Method Post-translational modification Subcellular trafficking Activity Reference
TRPV1 Link AKAP-5 Cell surface biotinylation Increase in plasma membrane level 18701070
TRPV1 Link AKAP-5 Co-immunofluorescence staining Increase in plasma membrane level 23699529
TRPV1 Link AKAP-5 Co-immunoprecipitation Increase in plasma membrane level 23616546
TRPV1 Link AKAP-5 In vivo PTM assay Phosphorylation 18381233
TRPV1 Link AKAP-5 Patch clamp Activation 18701070
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
TRP / Interactor

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