BKca / TRP channels

Name: Calcium-activated potassium channel subunit alpha-1 (BKca)
Official Symbol: KCNMA1 provided by HGNC
Function:
Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).
Source: Reorganizing the protein space at the Universal Protein Resource (UniProt) Nucleic Acids Res. 40: D71-D75 (2012).
Species External DB Questionmark
Entrez Gene UniprotKB DIP IntAct MINT BioGRID STRING IUPHAR-DB KEGG OMIM
Human
Seq
3778External Q12791External DIP-29729NExternal Q12791External MINT-4825316External 109979External Q12791External   hsa:3778External 600150External
Mouse
Seq
16531External Q08460External DIP-42413NExternal Q08460External MINT-1203219External 200913External Q08460External   mmu:16531External  
Rat
Seq
83731External Q62976External DIP-40510NExternal Q62976External MINT-1203282External 249823External Q62976External   rno:83731External  
PPI pairs:
Biological Process:
Source: The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nat. Genet.. May 2000;25(1):25-9.
World Wide Web URL: http://www.geneontology.org/
Disease:
Source: Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University (Baltimore, MD), May, 2012.
World Wide Web URL: http://omim.org/
Screening Toggle
  Experimental screening Non-experimental screening Reference
TRP channel construct Interactor source
TRP channel Interactor Method Species Region Species Organ/tissue Sample type
TRPC1 Link BKca Inference Prediction 19168436
TRPC3 Link BKca Inference Prediction 19052171
TRPC6 Link BKca Inference Prediction 19052171
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Validation: In vitro validation Toggle
  Assay with recombinant proteins Reference
TRP channel construct Interactor construct
TRP channel Interactor Method Species Region Expression system Species Region Expression system
TRPC3 Link BKca Fusion protein-pull down assay Not used Mouse podocyte lysates Chicken Full-length E. coli 19052171
TRPC6 Link BKca Fusion protein-pull down assay Not used Mouse podocyte lysates Chicken Full-length E. coli 19052171
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
Validation: In vivo validation Toggle
  Assay with endogenous proteins Assay with overexpressed proteins Reference
Cell or tissue Cell or tissue TRP channel construct Interactor construct
TRP channel Interactor Method Species Region Species Region
TRPC1 Link BKca Co-immunofluorescence staining Rat aortic vascular smooth muscle cell 19168436
TRPC1 Link BKca Co-immunoprecipitation HEK293 Human Full-length Human Full-length 19168436
TRPC1 Link BKca Co-immunoprecipitation Rat vascular smooth muscle cell 19168436
TRPC3 Link BKca Co-immunofluorescence staining HEK293T Not specified Full-length Not specified Full-length 19052171
TRPC3 Link BKca Co-immunoprecipitation Mouse podocyte lysates 19052171
TRPC3 Link BKca Co-immunoprecipitation HEK293T Not specified Full-length Not specified Full-length 19052171
TRPC6 Link BKca Co-immunofluorescence staining HEK293T Not specified Full-length Not specified Full-length 19052171
TRPC6 Link BKca Co-immunoprecipitation Mouse podocyte lysates 19052171
TRPC6 Link BKca Co-immunoprecipitation HEK293T Not specified Full-length Not specified Full-length 19052171
(Link: click the arrow icon to show interactions only between the corresponding TRP channel and the interactor)
TRP / Interactor

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